organized scripts

build_exocortex.sh

@@ -0,0 +1,18 @@
+#This script creates the exocortex
+
+# start clean
+rm -rf ./public/exocortex-hugo-md/public/*
+rm -rf ./public/exocortex-hugo-md/content/
+
+# create hugo md files using ox-hugo
+emacs -Q  --batch -l ox-hugo-exocortex.el 
+
+# build create html files from hugo markdown files using quartz
+cd ./public/exocortex-hugo-md/
+npx quartz build
+cd ../../
+
+# copy the generated folder to the main public site 
+rsync -avi --delete ./public/exocortex-hugo-md/public/  ./public/cosmicflow-html/exocortex/
+
+echo "exocortex created"

content/countable_union_of_countable_sets_is_countable.org

@@ -168,7 +168,7 @@ Then
 
 Since $S: \mathbb{N} \times \mathbb{N} \rightarrow \mathbb{N}$ is both injective and surjective, it is a bijection, we are done.
 
-* An Interesting Applications 
+* An Interesting Application
 *The set of finite subsets of $\mathbb{N}$ is countable.* 
 Let $A_i$ be set of all subsets of $\mathbb{N}$ containing $i$ elements,  that is with cardinality $i$.
 

copy-pics.sh

@@ -0,0 +1,19 @@
+# Set the source and destination directories
+src_dir="./public/cosmicflow-html"
+src_pics_dir="./assets/pics/"
+
+# Loop through each subdirectory
+for dir in "$src_dir"/*; do
+  if [ -d "$dir" ]; then
+    dir_name=$(basename "$dir")
+    dst_pics_dir="${src_dir}/${dir_name}/pics"
+
+    # Create the destination subdirectory if it doesn't exist
+    if [ ! -d "$dst_pics_dir" ]; then
+      mkdir -p "$dst_pics_dir"
+    fi
+
+    # Use rsync to copy files starting with the subdirectory name as prefix
+    rsync -av --include="$dir_name*" --exclude="*" "${src_pics_dir}/" "${dst_pics_dir}/"
+  fi
+done

copy_latex_images.sh

@@ -0,0 +1,28 @@
+## The purpose of this script is to copy all latex images to the appropriate subdirectories
+
+
+rsync -avi ./content/ltximg ./public/cosmicflow-html/
+
+# Set the source and destination directories
+src_dir="./public/cosmicflow-html"
+src_ltximg_dir="./public/cosmicflow-html/ltximg"
+
+# Loop through each subdirectory
+for dir in "$src_dir"/*; do
+  if [ -d "$dir" ]; then
+    dir_name=$(basename "$dir")
+    dst_ltximg_dir="${src_dir}/${dir_name}/ltximg"
+    echo "$dir_name"  
+    # Create the destination subdirectory if it doesn't exist
+    if [ ! -d "$dst_ltximg_dir" ]; then
+      mkdir -p "$dst_ltximg_dir"
+    fi
+
+    # Use rsync to copy files starting with the subdirectory name as prefix
+    rsync -av --include="$dir_name*" --exclude="*" "${src_ltximg_dir}/" "${dst_ltximg_dir}/"
+  fi
+done
+
+rm -rf ./public/cosmicflow-html/ltximg/ltximg
+
+echo "Successfully copied latex images."

create-site.el

@@ -28,58 +28,6 @@
 (package-install 'htmlize)
 (package-install 'ox-gemini)
 
-;; ox-hugo for exocortex notes
-(use-package ox-hugo
-  :ensure t   ;Auto-install the package from Melpa
-  :pin melpa  ;`package-archives' should already have ("melpa" . "https://melpa.org/packages/")
-  :after ox
-  :config
-  (setq org-hugo-base-dir "~/projects/cosmicflow.space/public/exocortex-hugo-md" )
-  (setq org-hugo-default-section-directory "./")
-  )
-(setq org-roam-directory "~/projects/thought_garden/")
-
-;; modified this function from https://github.com/kaushalmodi/ox-hugo/discussions/585#discussioncomment-2335203
-(defun ox-hugo/export-all (&optional org-files-root-dir dont-recurse)
-  "Export all Org files (including nested) under ORG-FILES-ROOT-DIR.
-
-All valid post subtrees in all Org files are exported using
-`org-hugo-export-wim-to-md'.
-
-If optional arg ORG-FILES-ROOT-DIR is nil, all Org files in
-current buffer's directory are exported.
-
-If optional arg DONT-RECURSE is nil, all Org files in
-ORG-FILES-ROOT-DIR in all subdirectories are exported. Else, only
-the Org files directly present in the current directory are
-exported.  If this function is called interactively with
-\\[universal-argument] prefix, DONT-RECURSE is set to non-nil.
-
-Example usage in Emacs Lisp: (ox-hugo/export-all \"~/org\")."
-  (interactive)
-  (let* ((org-files-root-dir (or org-files-root-dir default-directory))
-         (dont-recurse (or dont-recurse (and current-prefix-arg t)))
-         (search-path (file-name-as-directory (expand-file-name org-files-root-dir)))
-         (org-files (if dont-recurse
-                        (directory-files search-path :full "\.org$")
-                      (directory-files-recursively search-path "\.org$")))
-         (num-files (length org-files))
-         (cnt 1))
-    (if (= 0 num-files)
-        (message (format "No Org files found in %s" search-path))
-      (progn
-        (message (format (if dont-recurse
-                             "[ox-hugo/export-all] Exporting %d files from %S .."
-                           "[ox-hugo/export-all] Exporting %d files recursively from %S ..")
-                         num-files search-path))
-        (dolist (org-file org-files)
-          (with-current-buffer (find-file-noselect org-file)
-            (message (format "[ox-hugo/export-all file %d/%d] Exporting %s" cnt num-files org-file))
-            (org-hugo-export-wim-to-md :all-subtrees)
-            (setq cnt (1+ cnt))))
-        (message "Done!")))))
-(ox-hugo/export-all org-roam-directory)
-
 ;; Load the publishing system
 (require 'ox-publish)
 (use-package ox-gemini)

create.sh

@@ -1,59 +1,17 @@
 #!/usr/bin/env sh
 
+# start with a clean slate
 rm -rf ./public/cosmicflow-html/
-rm -rf ./public/exocortex-hugo-md/content/
-rm -rf ./public/exocortex-hugo-md/public/*
 # generate the html and gemini versions of the site using org-publish
 emacs -Q  --batch -l create-site.el  
 
-rsync -avi ./content/ltximg ./public/cosmicflow-html/
 
-#sync exocortex notes 
+# run script to copy the generated latex images to the appropiate subdirectories
-cd ./public/exocortex-hugo-md/
+./copy_latex_images.sh 
-npx quartz build
-cd ../../
 
-rsync -avi --delete ./public/exocortex-hugo-md/public/  ./public/cosmicflow-html/exocortex/
+# Generate the exocortex
+./build_exocortex.sh 
 
-# Set the source and destination directories
+# Copy relavent pics to blog subdirectories
-src_dir="./public/cosmicflow-html"
+./copy-pics.sh 
-src_ltximg_dir="./public/cosmicflow-html/ltximg"
 
-# Loop through each subdirectory
-for dir in "$src_dir"/*; do
-  if [ -d "$dir" ]; then
-    dir_name=$(basename "$dir")
-    dst_ltximg_dir="${src_dir}/${dir_name}/ltximg"
-
-    # Create the destination subdirectory if it doesn't exist
-    if [ ! -d "$dst_ltximg_dir" ]; then
-      mkdir -p "$dst_ltximg_dir"
-    fi
-
-    # Use rsync to copy files starting with the subdirectory name as prefix
-    rsync -av --include="$dir_name*" --exclude="*" "${src_ltximg_dir}/" "${dst_ltximg_dir}/"
-  fi
-done
-
-# Set the source and destination directories
-src_dir="./public/cosmicflow-html"
-src_pics_dir="./assets/pics/"
-
-# Loop through each subdirectory
-for dir in "$src_dir"/*; do
-  if [ -d "$dir" ]; then
-    dir_name=$(basename "$dir")
-    dst_pics_dir="${src_dir}/${dir_name}/pics"
-
-    # Create the destination subdirectory if it doesn't exist
-    if [ ! -d "$dst_pics_dir" ]; then
-      mkdir -p "$dst_pics_dir"
-    fi
-
-    # Use rsync to copy files starting with the subdirectory name as prefix
-    rsync -av --include="$dir_name*" --exclude="*" "${src_pics_dir}/" "${dst_pics_dir}/"
-  fi
-done
-
-
-# rm -rf ./content/ltximg/

ox-hugo-exocortex.el

@@ -0,0 +1,73 @@
+;; ox-hugo for exocortex notes
+
+;; Set the package installation directory so that packages aren't stored in the
+;; ~/.emacs.d/elpa path.
+(require 'package)
+(setq package-user-dir (expand-file-name "./.packages"))
+(setq package-archives '(("melpa" . "https://melpa.org/packages/")
+			 ("melpa-stable" . "https://stable.melpa.org/packages/")
+                         ("elpa" . "https://elpa.gnu.org/packages/")))
+
+;; Initialize the package system
+(package-initialize)
+(unless package-archive-contents
+  (package-refresh-contents))
+
+;; Install use-package
+(unless (package-installed-p 'use-package)
+  (package-install 'use-package))
+(require 'use-package)
+
+
+(use-package ox-hugo
+  :ensure t   ;Auto-install the package from Melpa
+  :pin melpa  ;`package-archives' should already have ("melpa" . "https://melpa.org/packages/")
+  :after ox
+  :config
+  (setq org-hugo-base-dir "~/projects/cosmicflow.space/public/exocortex-hugo-md" )
+  (setq org-hugo-default-section-directory "./")
+  )
+(setq org-roam-directory "~/projects/thought_garden/")
+
+;; modified this function from https://github.com/kaushalmodi/ox-hugo/discussions/585#discussioncomment-2335203
+(defun ox-hugo/export-all (&optional org-files-root-dir dont-recurse)
+  "Export all Org files (including nested) under ORG-FILES-ROOT-DIR.
+
+All valid post subtrees in all Org files are exported using
+`org-hugo-export-wim-to-md'.
+
+If optional arg ORG-FILES-ROOT-DIR is nil, all Org files in
+current buffer's directory are exported.
+
+If optional arg DONT-RECURSE is nil, all Org files in
+ORG-FILES-ROOT-DIR in all subdirectories are exported. Else, only
+the Org files directly present in the current directory are
+exported.  If this function is called interactively with
+\\[universal-argument] prefix, DONT-RECURSE is set to non-nil.
+
+Example usage in Emacs Lisp: (ox-hugo/export-all \"~/org\")."
+  (interactive)
+  (let* ((org-files-root-dir (or org-files-root-dir default-directory))
+         (dont-recurse (or dont-recurse (and current-prefix-arg t)))
+         (search-path (file-name-as-directory (expand-file-name org-files-root-dir)))
+         (org-files (if dont-recurse
+                        (directory-files search-path :full "\.org$")
+                      (directory-files-recursively search-path "\.org$")))
+         (num-files (length org-files))
+         (cnt 1))
+    (if (= 0 num-files)
+        (message (format "No Org files found in %s" search-path))
+      (progn
+        (message (format (if dont-recurse
+                             "[ox-hugo/export-all] Exporting %d files from %S .."
+                           "[ox-hugo/export-all] Exporting %d files recursively from %S ..")
+                         num-files search-path))
+        (dolist (org-file org-files)
+          (with-current-buffer (find-file-noselect org-file)
+            (message (format "[ox-hugo/export-all file %d/%d] Exporting %s" cnt num-files org-file))
+            (org-hugo-export-wim-to-md :all-subtrees)
+            (setq cnt (1+ cnt))))
+        (message "Done!")))))
+(ox-hugo/export-all org-roam-directory)
+
+(message "exocortex markdown created")